“Electrostatics of cysteine residues in proteins: parameterization and validation of a simple model,” F. R. Salsbury, L. Poole, & J. S. Fetrow, Proteins, 80(11), 2583-2591. Epub (2012).
“Synthesis and characterization of a novel prostate cancer-targeted phosphatidylinositol-3-kinase inhibitor prodrug,” D. Baiz, T. Pinder, S. Hassan, Y. Karpova, F. R. Salsbury, M. E. Welker, & G. Kulki, Journal of Medicinal Chemistry, 55(18), 8038-8046. Epub ( 2012).
“The molecular origin of the MMR-dependent apoptosis pathway from dynamics analysis of MutSα-DNA complexes,” L. Negureanu, & F. R. Salsbury, Journal of Biomolecular Structure & Dynamics, 30(3), 347-361. Epub (2012).
“Structural and Electrostatic Asymmetry at the Active Site in Typical and Atypical Peroxiredoxin Dimers,” F. R. Salsbury, Y. Yuan, M. Knaggs, L. Poole, & J. S. Fetrow, Journal of Physical Chemistry B, 116(23), 6832-6843. Epub (2012).
“Insights into Protein – DNA Interactions, Stability and Allosteric Communications: A Computational Study of Mutsα-DNA Recognition Complexes,” L. Negureanu & F. R. Salsbury, Journal of Biomolecular Structure & Dynamics, 29(4), 757-776 (2012).
“Zn2+ Selectively Stabilizes FdU-substituted DNA through a Unique Major Groove Binding Motif,” S. Ghosh, F. R. Salsbury, D. A. Horita, & W. Gmeiner, Nucleic Acids Research, 39(10), (2011).
“Cooperative Nuclear Localization Sequences Lend a Novel Role to the N-terminal Region of MSH6,” N. R. Gassman, J. E. Clodfelter, A. K. McCauley, K. D. Bonin, F. R. Salsbury, & K. D. Scarpinato, PLoS One, 6(3). 2011 (2011).
“Conformational Selectivity: Targeting the 'death' Conformation of Mutsalpha, ” F. R. Salsbury, K. D. Scarpinato, A. Vasilyeva, Biophysical Journal, (vol. 100, 378 pp.) (2011).
“Molecular dynamics simulations of protein dynamics and their relevance to drug discovery,” F. R. Salsbury, Curr Opin Pharmacol, 10(6), 738-744 (2010).
“Parameters of Reserpine Analogs That Induce MSH2/MSH6-Dependent Cytotoxic Response,” A. Vasilyeva, J. E. Clodfelter, M. Gorczynski, A. Gerardi, S. B. King, F. R. Salisbury, & K. D. Scarpinato, J Nucleic Acids., 162018, Sept 13(2010).
“Conformational and oligomeric effects on the cysteine pK(a) of tryparedoxin peroxidase,” Y. Yuan, M. H. Knaggs, L.B. Poole, F. R. Salsbury, & J. S. Fetrow, J Biomol Struct Dyn., 28(1), 51-70 (2010).
“Effects of Cisplatin binding to DNA on the dynamics of the E Coli MutS dimer,” F. R. Salsbury, Protein Pept Lett, 17(6), 744-750 (2010).
“Molecular Dynamic Simulations of the Metallo-beta-lactamase from Bacteroides Fragilis in the Presence and Absence of a Tight-binding iIhibitor,” M. W. Crowder, S. F. Kingsmore, and J. J. Huntley, Journal Of Molecular Modeling, 15(2), 133-145 (2009).
“Small Molecule Induction of MSH2-dependent Cell Death Suggests a Vital Role of Mismatch Repair Proteins in Cell Death,” A. Vasilyeva, J. E. Clodfelter, B. Rector, T. Hollis, and K. Scarpinato, DNA Repair, 8(1), 103-113 (2009).
“Small Molecule Induction of MSH2-dependent Cell Death Suggests a Vital Role of Mismatch Repair Proteins in Cell Death,” A. Vasilyeva, J. E. Clodfelter, B. Rector, T. Hollis, K. Scarpinato, and F. R. Salsbury, DNA Repair, 8(1), 103-113 (2009).
“Small Molecule Induction of MSH2-dependent Cell Death Suggests a Vital Role of Mismatch Repair Proteins in Cell Death,” A. Vasilyeva, J. E. Clodfelter, B. Rector, T. Hollis, K. Scarpinato, and F. R. Salsbury, DNA Repair, 8(1), 103-113 (2009).
“Functional Site Profiling and Electrostatic Analysis of Cysteines Modifiable to Cysteine Sulfenic Acid,” F. R. Salsbury, S. T. Knutson, L. B. Poole, and J. S. Fetrow, Protein Science, 17, 299-312 (2008).
"Electrostatic Analysis of Cysteines Modifiable to Cysteines Sulfenic Acid," F. R. Salsbury Jr., S. T. Knutson, L. B. Poole, and J. S. Fetrow, Functional Site Profiling and Protein Science 17:299-312 (2008).
“Insights into CheY Relaxation and Relaxation Derived from Molecular Dynamics Simulations,” M. H. Knaggs, F. R. Salsbury, M. H. Edgell, J. S. Fetrow, Biophys J .2062-2079 (Mar 15 2007).
“The Molecular Mechanism of DNA Damage Recognition by MutS Homologs and its Distinction from Mismatch Binding,” F.R. Salsbury, Jr., J. Clodfelter, M. Gentry, T. Hollis, and K. D. Scarpinato, Nucleic Acids Research 34 (8), 2173-2185 (2006).
“Analysis of Errors in Stil's Equation for Macromolecular Solvation,” F. R. Salsbury, Jr., Molecular Physics 104 (20), 1299-1309 (April 2006).
"An Efficient Hybrid Implicit/Explicit Solvent Method for Biomolecular Simulations that Uses A Generalized Born Reaction Field and Multigrid Enhancements," M.S. Lee, F. R. Salsbury, Jr., and M. A. Olson, J. Comp. Chem, 25: 1967-1978, (2004).
"Mutations in the Nucleotide-binding Domain of MutS Homologs Uncouple Cell Death from Cell Survival," K. Drotschmann, R. P. Topping, J. E. Clodfelter, and F. R. Salsbury, Jr., DNA Repair 3 (7):729-742 (2004).
"Direct Binding of FADD to the TRAIL Receptor DR5 is Regulated by the Death Effector Domain of FADD," L. R. Thomas, A. Henson, J. C. Reed, F. R. Salsbury, Jr., and A. Thorburn, J. Bio. Chem. 279, 31 (2004).
"Constant pH-molecular Dynamics using Continuous Titration Coordinate,” M. S. Lee, F. R. Salsbury, Jr., and C. L. Brooks, III, Proteins: Structure, Function and Bioinformatics 56 (4):738-752 (2004).
“New Analytic Approximation to the Standard Molecular Volume Definition and its Application to Generalized Born Calculations,” M. S. Lee, M. Feig, F. R. Salsbury, and C. L. Brooks, Journal of Computational Chemistry 24 (24 August 2003).
“Temperature-dependent Behavior of Protein-chromophore Interactions: A Theoretical Study of a Blue Fluorescent Antibody,” F. R. Salsbury, W. G. Han, L. Noodleman, and C. L. Brooks, Chemphyschem 4, (August 18, 2003).
“New and Novel Generalized Born Methods,” M. S. Lee, F. R. Salsbury, Jr, and C. L. Brooks, III., J. Chem. Phys. 116, 24, 10606-10614 (2002).
“Modeling of the Metallo-beta-lactamase from B. Fragilis: Structural and Dynamic Effects of Inhibitor Binding,” F. R. Salsbury, Jr., M. F. Crowley, and C. L. Brooks, III, Proteins: Structure, Function, and Genetics 44(4) 448-459 (2001).
“A Nonlocal Current Density Functional for Magnetic Responses,” F. R. Salsbury, Jr. and R. A. Harris, J. Chem. Phys. 108(15), 6102-6108 (1998).
“On the Origin of the Magnetic Field Dependent Quadrupolar Splitting,” F. R. Salsbury, Jr. and R. A. Harris, J. Chem.. Phys. 109(19), 8338-8341 (1998).
“The exchange energy in a weak magnetic field, “ R. A. Harris and F. R. Salsbury, Jr., J. Chem. Phys., 109 (7), 2609-2613 (1998).
“Estimation of the Fermi Contact Contribution to the Xenon-Hydrogen and Xenon-Xenon Spin-Spin Coupling Constants,” F. R. Salsbury, Jr. and R. A. Harris, Mol. Phys. 94 (2), 307-312 (1998).
“Hydrogen chemical shieldings: A magnetic field density functional approach,” F. R. Salsbury, Jr. and R. A. Harris, Chem. Phys. Lett. 279 (3,4), 247-251 (1997).
“The current in magnetic field density functional theory and its application to the chemical shielding and the magnetic susceptibility,” F. R. Salsbury, Jr. and R. A. Harris, J. Chem. Phys, 107 (18), 7350-7359 (1997).